Publication data extraction from Pubmed

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kmpere
kmpere's picture
Publication data extraction from Pubmed

Hi,
I have a very large publication list (>50,000) for an analysis. I have Pubmed IDs for each publication and want to extract clean Pubmed publication data (Author, title, page, journal, etc) for each by inputing the Pubmed ID. I know I can do this for a smaller number of publications with a query like this:
http://www.ncbi.nlm.nih.gov/pubmed?term=19952353%5Buid%5D%20OR%2020363671%5Buid%5D%20OR%2020149730%5Buid%5D%20OR%2020369758%5Buid%5D&cmd=DetailsSearch

However, this method does not work for a large number of publications.

Is there another way to do this on Pubmed website or using any Pubmed tools available (eg. Entrez programming)?
Are there third party software that allow to extract Pubmed data by inputting Pubmed IDs?

Any suggestions would be appreciated.
Thank you.