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Finding a suitable denaturing agent

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cindyfunnybaby
Hong Kong

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Topic Started by cindyfunnybaby
on 1/13/2009 0:56 AM   
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Hi, everyone

I got some problems in denaturing the endogenous collagenase of planarian extract. I had try to use 8 M of urea and complete protease inhibitor for extraction, but I still cannot inhibit the collagenase activity.
what another denaturing agent that I can used to solve this problem? Does guanidine - HCl is a good choice?

thank you v.much~


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kjosephs
United States

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Posted By kjosephs
on 1/17/2009 9:12 AM   
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cindyfunnybaby said:
Hi, everyone I got some problems in denaturing the endogenous collagenase of planarian extract. I had try to use 8 M of urea and complete protease inhibitor for extraction, but I still cannot inhibit the collagenase activity. what another denaturing agent that I can used to solve this problem? Does guanidine - HCl is a good choice? thank you v.much~


GuHCl at 6M is also worth trying.  You can also try  heating your sample in the 8M Urea or 6 M GuHCl.  Does collagenase have disulfide bonds?  Are you adding reductant, DTT or BME?


I have not used GuHCl at higher than 6M.  Anyone else?



R Bishop
United States

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Posted By R Bishop
on 1/17/2009 9:24 AM   
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Im pretty sure GuHCL will denature anything at 4M.  Will try to find a reference.

"Everything should be made as simple as possible, but no simpler."
-- Einstein



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