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Cloning into pBluescript (pBS)

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ssiddara
United States

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Topic Started by ssiddara
on 3/7/2005 14:15 PM
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Could someone please help me?

What is the largest DNA insert that can be cloned into the Strategene's phagemid vector pBluescript?

I have amplified a 21 kb fragment by PCR and I need to clone into some vector

Thanks
ssiddara


Last edited Jan 13, 2009, 8:31 AM by RLS
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frasermoss
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Posted By frasermoss on 3/10/2005 19:29 PM
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Sounds to me like you need think about using a PAC (P1 artificial chromosome).

plasmids contain P1 origins of replication

(lysogenic & lytic)

advantages: stable as plasmid vector

lytic growth produces large amounts DNA

(but no phage particles)

easy to work with

clone & transform cells as plasmid vector

disadvantages: no size selection from packaging

do you just want lots of copies of the fragment or is there something in there you need to express in cells?



badcell
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Posted By badcell on 4/5/2005 18:27 PM
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The longest insert I introduced into bluescript was 9 kb, but I've seen papers in which they cloned >20 kb fragments into the vector, so I guess it's possible to do it. In any case, I would advise you not to use normal DH5a competent cells for these types of long constructs, but some of those "ultra-competent" cells for transformation of large plasmids.
Cheers!

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vasussci
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Posted By vasussci on 8/15/2005 12:38 PM
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Cosmid vectors are great plasmids for an intermediate insert size (20-45kb) when working in e.coli. They work like regular plasmids, but are very efficient in maintaining the larger inserts. They were popular back in the day with 'finishing' to fill sequence gaps for genomic seqencing gaps. Unfortunately, I can't provide any specific cosmids for your purposes...

Ian Taylor
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MadScientist74
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Posted By MadScientist74 on 8/30/2005 1:27 AM
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Pls dun use pBS... your insert is way too big.

If you are up to it... try using EMBL3/4 vectors... these are lambda phage vectors.

Otherwise, cosmids would be the next choice.





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