Award
 » Home » Bioinformatics » Miscellaneous » Gene ontology help
 
Solutions Search! The Customized Life Science Search Engine
Search Site
Search Suppliers
Search Internet
Search over 6000 life science websites specifically selected by our expert scientist moderators.

Other Topics
8/18/2008 07:48 PM
Computational Biology Res ...
8/12/2008 02:30 PM
Most influential bioinfor ...
8/4/2008 11:56 PM
Influential bioinformatic ...
8/4/2008 11:10 PM
New Biology Search Engine
6/23/2008 12:11 AM
Announcement of a new web ...
6/20/2008 08:48 AM
looking for Freezer inven ...
5/15/2008 05:27 AM
Mac vs PC
5/14/2008 06:13 PM
Importing a PDF into a Wo ...
1/31/2008 06:12 PM
Cytoscape open source bio ...
1/29/2008 01:28 AM
DNASTAR signs Lasergene M ...
1/14/2008 09:43 PM
NAR Database Issue
12/5/2007 07:23 PM
Free gene browser
11/25/2007 06:48 PM
Using of SSEARCH, ScanPS, ...
11/15/2007 05:30 AM
TaqMan probe design
11/13/2007 07:28 AM
Web-based phylogenetics t ...
11/9/2007 07:29 AM
ask for Fluxus' DNA Align ...
11/5/2007 04:49 PM
Ask for your help about t ...
10/31/2007 07:06 PM
Favorite tool for motif d ...
9/3/2007 05:04 AM
anyone have tried Geneiou ...
8/14/2007 04:35 PM
BioMoby Help
7/9/2007 05:24 PM
RPro Statistical Software
5/20/2007 07:13 PM
NOC 3.0 is released
5/3/2007 09:23 AM
Pymol: HighResolution Ray ...
3/28/2007 03:00 AM
Another bioinformatics on ...
3/22/2007 05:25 PM
Help required with a very ...
3/1/2007 09:26 PM
Pathway database (integra ...
2/23/2007 07:09 PM
wikiomics - a wiki forum ...
1/31/2007 07:05 PM
Premier Biosoft Releases ...
1/31/2007 12:15 AM
PDZbase
1/3/2007 08:20 PM
Analysis software
Subscribet to topic
bottom of page RSS Feed Topic Feed
 Gene ontology help [View Printable]
rishcaar

Frog Egg

See
Similar
Scientists





Group: Member
Posts: 1
Joined: Apr 12, 2008







 Send a personal messsage to rishcaar Reply with a quote from this post Go to the top of the page

I have a collection of ~1000 human genes which share a I have a collection of ~1000 human genes which share a common feature and decided it would be useful to collect gene ontology data to look for any commonality, which may indicate function. However I am not having much luck !

Does anybody know of a tool that can collect this data for me without having to do it manually, I have found a good site for mouse genes;

http://proto.informatics.jax.org/prototypes/GOTools/web-docs/MGI_Term_Finder.html

For the MGI site you just paste a list of gene ID’s and it gets all the GO terms for you but I cant find anything similar for human genes.

If anyone knows of anything please let me know it would help a great deal

Thanks
.........................

 Posted Apr 12, 2008, 19:39 PM
bgood

Frog Laureate

See
Similar
Scientists





Group: Moderators
Posts: 145
Joined: Apr 12, 2006







 Go to homepage of bgood Send a personal messsage to bgood Reply with a quote from this post Go to the top of the page

Hi rishcaar,

I've used both the Babelomics tools and the Onto Tools for this type of analysis with some success.

Let us know how you get on with those.

(BTW, 1000 is kind of a long list.. you might want to think about other ways to filter it before trying this kind of analysis).
.........................

Posted Apr 13, 2008, 15:41 PM
top of page

Forum Jump