First, I will assume that the mass-spec is behaving "normally"; obviously if the mass-spec is not operating correctly, all bets are off on your quantitation. That being said, most chromatography problems are either in the inlet or that you have active sites at the head of the column, both are typically addressed by routine column maintenance.
Our instrument chemists, prior to each day's samples, are replacing the inlet liner and base-plate. They will also remove about 4 - 6 inches from the head of the column. Once doen they reassemble, allow the inlet to become oxygen free, and then heat it up. We will typically inject a solvent blank once or twice to equilibrate the system.
To solve a leak, I would simply go and verify I haven't left somethig loose, or that when I installed the column, it did not slip down and that I do not have the correct length of column above the capillary ferrule.
To give you much more help, we'll need more info, such as instrument, type of injection, (split - splitless, etc), and what analysis.
Greg