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Rabbit Reticulocyte Lysate System

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gsovak
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Topic Started by gsovak
on 12/20/2006 21:01 PM
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Hi all,
Did Someone used the Rabbit Reticulocyte Lysate System from Promega?
I want to start doing in vitro Ubiquitination assay and add this lysate.
I read several articles but would love to hear from anyone who used it.
Guy


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frasermoss
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Posted By frasermoss on 1/5/2007 23:00 PM
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I have used it for on vitro protein synthesis and for the incorporation of unnatural amino acids in to in vitro translated proteins.



gsovak
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Posted By gsovak on 4/12/2007 17:42 PM
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Hi Frasermoss,
The reticulocyte lysate assay that I wanted to do some time ago is comming once again to my bench :-9
So If you could tell me some tips that you have for me I would be happy.
My Idea is to use a plasma membrane protein WT and Mutant and try to check if addition of chapeornes will change the rescuing of the protein.
Guy



frasermoss
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Posted By frasermoss on 4/12/2007 18:41 PM
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what are you rescuing? protein folding? translation?

Why will the rabbit reticular lysate system be suitable for your experiment?



guy
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Posted By guy on 4/15/2007 1:12 AM
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Refolding of a protein.
I want to try this in vitro system as I can add different chaperones and check their importance in the refolding of the protein of intrest.
GUy



frasermoss
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Posted By frasermoss on 4/16/2007 14:01 PM
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I don't think there are any dark secrets to this system. I generally followed the manufacturer translation protocol and scaled it as appropriate for my application. One thing I did do was include 1 ul RNase inhibitor (Roche) to each reaction. But that was mainly to protect the tRNA+unnatural amino acid that I was introducing into the system. You will have to experiment with how much protein to run on blots if that is what you plan to do. It makes a lot of protein.



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Posted By Fizz on 5/10/2007 23:23 PM
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Actually there is a secret ;) The lysate is ruined after 2 freeze-thaw cycles. Calculate the reaction volumes you need and then aliquot it the FIRST time you thaw it. It can be stored at -80C for over a year however long term storage was in LN2.
Apart from that, the other thing of some importance is that the protein amount produced depends a lot on the template. Linearized templates seem to generate higher amounts of protein.
Another obvious detail (though often ignored) is that the salt type and concentrations seem to play a very important role.
So you will have to do some experiments to get the system optimized.
There are good details given in the Promega Protocols volumes as well.